Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
accD3_1Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta. (497 aa)    
Predicted Functional Partners:
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
  
  
 0.997
accD3_2
Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
 
0.996
accD3_3
Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
 
0.996
AMY52259.1
Hypothetical protein.
  
 
 0.979
accC_3
Biotin carboxylase.
  
 
 0.975
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.950
inhA_2
Enoyl-[acyl-carrier-protein] reductase [NADH].
  
  
 0.946
accC_1
Biotin carboxylase.
 
 0.944
accC_2
Biotin carboxylase.
 
 0.944
accA1_2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.941
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (14%) [HD]