Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
eisEnhanced intracellular survival protein. (399 aa)    
Predicted Functional Partners:
whiB7
Putative transcriptional regulator WhiB7; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
   
  
 0.672
AMY52065.1
Putative TrmH family tRNA/rRNA methyltransferase.
     
 0.659
comEA
ComE operon protein 1.
  
    0.634
AMY54050.1
Hypothetical protein.
     
 0.627
tlyA
16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA.
      
 0.623
inhA_2
Enoyl-[acyl-carrier-protein] reductase [NADH].
      
 0.618
AMY52064.1
Hypothetical protein.
       0.578
entS_1
Enterobactin exporter EntS.
   
  
 0.575
entS_2
Enterobactin exporter EntS.
   
  
 0.575
mdtG
Multidrug resistance protein MdtG.
   
  
 0.575
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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