Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fgd1_1F420-dependent glucose-6-phosphate dehydrogenase. (328 aa)    
Predicted Functional Partners:
AMY55285.1
Putative nitroreductase.
  
   
 0.678
ddn
Deazaflavin-dependent nitroreductase.
  
   
 0.637
dapC
Putative N-succinyldiaminopimelate aminotransferase DapC.
 
     0.613
fgd1_4
F420-dependent glucose-6-phosphate dehydrogenase.
  
     0.610
cofD
2-phospho-L-lactate transferase.
 
   
 0.594
AMY52320.1
Putative nitroreductase.
  
   
 0.583
AMY52094.1
Putative HTH-type transcriptional regulator.
       0.554
fbiB_1
Coenzyme F420:L-glutamate ligase.
 
  
 0.536
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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