Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yqjH_1NADPH-dependent ferric-chelate reductase. (297 aa)    
Predicted Functional Partners:
dhbE
2,3-dihydroxybenzoate-AMP ligase.
 
  
 0.756
yusV_1
Putative siderophore transport system ATP-binding protein YusV.
 
  
 0.741
mbtI
Salicylate synthase.
  
  
 0.720
pvdA_1
L-ornithine N(5)-monooxygenase.
 
  
 0.707
fepG
Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.680
fepD
Ferric enterobactin transport system permease protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.671
mbtB
Phenyloxazoline synthase MbtB.
  
  
 0.638
phzD
Putative isochorismatase.
 
  
 0.619
panD_1
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.558
AMY52409.1
Putative ABC transporter ATP-binding protein.
 
 
 0.523
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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