Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY52193.1Hypothetical protein. (664 aa)    
Predicted Functional Partners:
AMY52194.1
Undecaprenyl-phosphate mannosyltransferase.
 
  
 0.981
AMY52195.1
HIT-like protein.
       0.762
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
       0.697
fruA
PTS system fructose-specific EIIABC component.
 
   
 0.504
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.442
AMY53401.1
Hypothetical protein.
 
  
 0.432
AMY53707.1
Hypothetical protein.
  
  
 0.423
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
  
  
 0.423
pgdA
Peptidoglycan deacetylase.
  
  
 0.423
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.