Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY52259.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
accD3_1
Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
  
 
 0.979
accD3_2
Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
  
 
 0.979
accD3_3
Putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
  
 
 0.979
AMY52260.1
Hypothetical protein.
 
     0.953
birA
Bifunctional ligase/repressor BirA.
  
 0.861
ribD_1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.840
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
  
  
 0.807
ectC
L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.
 
  
 0.737
ppsA
Phthiocerol synthesis polyketide synthase type I PpsA.
  
  
 0.657
ectB
Diaminobutyrate--2-oxoglutarate transaminase.
 
     0.637
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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