Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xylB_1Aryl-alcohol dehydrogenase. (367 aa)    
Predicted Functional Partners:
AMY52708.1
Putative aldehyde dehydrogenase.
  
 0.915
styD
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.915
maoII
Copper methylamine oxidase.
     
 0.903
puo_2
Putrescine oxidase.
     
  0.900
betB
NAD/NADP-dependent betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.669
AMY51724.1
Putative zinc-binding alcohol dehydrogenase.
  
  
 0.505
pobB_1
Phenoxybenzoate dioxygenase subunit beta.
     
 0.505
fbpB_3
Diacylglycerol acyltransferase/mycolyltransferase Ag85B.
  
 
 0.503
fbpC_2
Diacylglycerol acyltransferase/mycolyltransferase Ag85C.
  
 
 0.502
fbpA_2
Diacylglycerol acyltransferase/mycolyltransferase Ag85A.
  
 
 0.502
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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