Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ydbDPutative manganese catalase. (303 aa)    
Predicted Functional Partners:
sodA
Mn superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.803
splG
Spore photoproduct lyase.
  
     0.656
AMY53460.1
Putative zinc-binding alcohol dehydrogenase.
 
  
 0.608
sodC
Cu-Zn superoxide dismutase.
   
 
 0.565
AMY53439.1
Hypothetical protein.
 
     0.514
AMY51724.1
Putative zinc-binding alcohol dehydrogenase.
 
  
 0.511
petC1
Cytochrome b6-f complex iron-sulfur subunit 1.
 
     0.477
AMY53459.1
Hypothetical protein.
  
     0.448
yghA_2
Putative oxidoreductase YghA.
  
  
 0.446
AMY52661.1
Hypothetical protein.
  
     0.438
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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