Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
abgTP-aminobenzoyl-glutamate transport protein. (524 aa)    
Predicted Functional Partners:
abgB
P-aminobenzoyl-glutamate hydrolase subunit B; Belongs to the peptidase M20A family.
 
  
 0.603
AMY55523.1
Hypothetical protein.
  
    0.559
AMY53765.1
Hypothetical protein.
  
    0.530
yxeP
Putative hydrolase YxeP.
 
  
 0.523
aam_1
Acylamidase; Belongs to the amidase family.
       0.452
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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