Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY52362.1Putative acyl-CoA dehydrogenase fadE25. (356 aa)    
Predicted Functional Partners:
bbsG_2
(R)-benzylsuccinyl-CoA dehydrogenase.
 
     0.945
acdA_5
Acyl-CoA dehydrogenase.
 
     0.940
fadB_3
Fatty acid oxidation complex subunit alpha.
  
 0.897
acdA_7
Acyl-CoA dehydrogenase.
 
  
 0.884
AMY52360.1
Hypothetical protein.
 
     0.813
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.803
fadB_5
Fatty acid oxidation complex subunit alpha.
  
 0.803
etfB
Electron transfer flavoprotein subunit beta.
 
 
 0.779
AMY52364.1
Hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.772
pcaF
Beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.763
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.