Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bdhA_1D-beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)    
Predicted Functional Partners:
ccl
(R)-citramalyl-CoA lyase.
   
 
 0.920
yngG
Hydroxymethylglutaryl-CoA lyase YngG; Belongs to the alpha-IPM synthase/homocitrate synthase family.
   
 
 0.920
bdhA_2
D-beta-hydroxybutyrate dehydrogenase.
  
  
 
0.916
scoB_1
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B.
  
 0.914
scoB_2
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B.
  
 0.914
scoA_1
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A.
  
 
 0.906
scoA_2
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A.
  
 
 0.906
acsA_1
Acetyl-coenzyme A synthetase.
    
 0.902
ephD_5
Putative oxidoreductase EphD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.768
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
  
 0.737
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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