Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY52410.1Putative multidrug export ATP-binding/permease protein. (582 aa)    
Predicted Functional Partners:
AMY52409.1
Putative ABC transporter ATP-binding protein.
 
   
0.917
AMY52407.1
Hypothetical protein.
 
     0.629
acuC
Acetoin utilization protein AcuC.
 
 0.629
AMY52411.1
Hypothetical protein.
       0.599
AMY52408.1
Hypothetical protein.
       0.576
pvdA_1
L-ornithine N(5)-monooxygenase.
 
  
 0.570
ftsH_2
ATP-dependent zinc metalloprotease FtsH; Belongs to the AAA ATPase family.
   
 0.545
drrA_3
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
 0.536
yqjH_1
NADPH-dependent ferric-chelate reductase.
 
 
 0.515
yqjH_3
NADPH-dependent ferric-chelate reductase.
 
 
 0.515
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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