Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
csxAExo-beta-D-glucosaminidase. (805 aa)    
Predicted Functional Partners:
AMY52461.1
Hypothetical protein.
 
     0.971
AMY52453.1
Aminoacyl carrier protein.
 
  
 0.884
AMY52455.1
Amino acid--[acyl-carrier-protein] ligase.
 
     0.874
AMY52454.1
Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase.
 
   
 0.870
AMY55011.1
Hypothetical protein.
  
     0.694
AMY52456.1
Hypothetical protein.
 
     0.657
AMY51775.1
Hypothetical protein.
 
 
 0.536
AMY54682.1
Hypothetical protein.
  
   
 0.521
AMY54684.1
Hypothetical protein.
  
 
 0.498
bmr3_2
Multidrug resistance protein 3.
  
 
 0.469
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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