Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmp_23-ketosteroid-9-alpha-hydroxylase reductase subunit. (364 aa)    
Predicted Functional Partners:
paaB
1,2-phenylacetyl-CoA epoxidase, subunit B.
 
  
 0.781
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
  
 0.741
paaA
1,2-phenylacetyl-CoA epoxidase, subunit A.
 
 
 0.734
pobB_2
Phenoxybenzoate dioxygenase subunit beta.
 
   
 0.724
lipF_2
Carboxylesterase LipF.
 
 
   0.723
paaD
Putative 1,2-phenylacetyl-CoA epoxidase, subunit D.
 
  
 0.715
paaC
1,2-phenylacetyl-CoA epoxidase, subunit C.
 
 
 0.713
iscS
IscS-like cysteine desulfurase.
  
 0.699
fprB_1
Putative ferredoxin/ferredoxin--NADP reductase.
   
 0.684
fprB_2
Putative ferredoxin/ferredoxin--NADP reductase.
   
 0.684
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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