Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fabG_63-oxoacyl-[acyl-carrier-protein] reductase FabG. (230 aa)    
Predicted Functional Partners:
AMY52555.1
Hypothetical protein.
 
     0.915
dppA_1
Periplasmic dipeptide transport protein.
 
   
 0.786
limC
(-)-trans-carveol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.755
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2.
  
 0.737
bdhA_1
D-beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.730
AMY52557.1
Hypothetical protein.
 
   
 0.729
ephD_5
Putative oxidoreductase EphD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.714
fabG_14
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
     0.697
fabG_11
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
     0.687
linC_1
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
  
     0.678
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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