Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bphC2Biphenyl-2,3-diol 1,2-dioxygenase 2. (211 aa)    
Predicted Functional Partners:
tfdB
2,4-dichlorophenol 6-monooxygenase.
 
   
 0.905
AMY52682.1
Ureidoglycolate lyase.
 
   
 0.807
AMY53510.1
Hypothetical protein.
 
  
 0.783
azoB_1
NAD(P)H azoreductase.
 
     0.760
AMY51815.1
2,6-dihydropseudooxynicotine hydrolase; Belongs to the UPF0255 family.
 
     0.719
mhpA
3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase.
 
   
 0.686
AMY53055.1
Hypothetical protein.
 
   
 0.653
AMY52680.1
Hypothetical protein.
 
     0.629
AMY53511.1
Hypothetical protein.
  
     0.605
AMY52671.1
Hypothetical protein.
  
     0.573
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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