Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tfdB2,4-dichlorophenol 6-monooxygenase. (589 aa)    
Predicted Functional Partners:
clcA
Chlorocatechol 1,2-dioxygenase.
  
 
 0.908
bphC2
Biphenyl-2,3-diol 1,2-dioxygenase 2.
 
   
 0.905
AMY52682.1
Ureidoglycolate lyase.
 
  
 0.820
xlnD
3-hydroxybenzoate 6-hydroxylase 1.
  
   
 0.800
azoB_1
NAD(P)H azoreductase.
 
  
 0.783
npcC
Hydroxyquinol 1,2-dioxygenase.
 
  
 0.709
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.702
hmgA
Homogentisate 1,2-dioxygenase.
  
  
 0.696
pcaB
3-carboxy-cis,cis-muconate cycloisomerase.
 
  
 0.694
AMY52670.1
Cytochrome p450 CYP199A2.
 
 
 0.680
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.