Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY52692.1D-mannonate dehydratase. (401 aa)    
Predicted Functional Partners:
por_1
Polyol:NADP oxidoreductase; Belongs to the mannitol dehydrogenase family.
 
  
 0.984
kdgK_2
2-dehydro-3-deoxygluconokinase.
 
  
 0.966
por_2
Polyol:NADP oxidoreductase; Belongs to the mannitol dehydrogenase family.
 
  
 0.931
AMY54967.1
D-galactonate dehydratase family member.
  
  
 
0.902
kdgK_3
2-dehydro-3-deoxygluconokinase.
 
  
 0.849
eda
KHG/KDPG aldolase.
 
   
 0.830
gndA
6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.806
gntZ
6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating.
     
  0.800
rpiB
Ribose-5-phosphate isomerase B.
     
  0.800
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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