Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMY52736.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
fabG_8
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
 0.979
fadI
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.978
acrC_1
Acryloyl-CoA reductase (NADH).
 
 0.752
fadJ
Fatty acid oxidation complex subunit alpha.
 
 0.693
fadB_3
Fatty acid oxidation complex subunit alpha.
 
 0.685
bcd_2
Acyl-CoA dehydrogenase, short-chain specific.
 
 0.619
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.615
katA
Catalase; Belongs to the catalase family.
   
 0.615
AMY52479.1
Putative HTH-type transcriptional regulator.
 
     0.576
acrC_2
Acryloyl-CoA reductase (NADH).
 
 0.564
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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