Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylB_2Xylulose kinase; Belongs to the FGGY kinase family. (466 aa)    
Predicted Functional Partners:
ulaF
L-ribulose-5-phosphate 4-epimerase UlaF.
 
 
 0.955
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.939
fruA
PTS system fructose-specific EIIABC component.
     
 0.677
dauA_3
C4-dicarboxylic acid transporter DauA.
  
    0.645
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.623
mtlK_1
Mannitol 2-dehydrogenase.
 
  
 0.609
araA_1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.565
galK
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.565
araB
Ribulokinase.
 
  
 0.561
gutB_3
Sorbitol dehydrogenase.
  
  
 0.559
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.