Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY52849.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
desA1_3
Putative acyl-[acyl-carrier-protein] desaturase desA1.
 
     0.609
AMY52838.1
Hypothetical protein.
  
    0.576
AMY52427.1
Hypothetical protein.
  
     0.574
AMY52850.1
Hypothetical protein.
       0.539
AMY55808.1
Hypothetical protein.
  
     0.531
AMY55250.1
Hypothetical protein.
  
     0.523
AMY53690.1
Hypothetical protein.
  
     0.444
AMY55935.1
Hypothetical protein.
  
     0.429
AMY53131.1
Hypothetical protein.
  
     0.418
AMY52769.1
Hypothetical protein.
 
   
 0.407
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.