Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY52854.1Hypothetical protein. (527 aa)    
Predicted Functional Partners:
drrA_4
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.988
betI_5
HTH-type transcriptional regulator BetI.
 
  
 0.903
ybhF
Putative ABC transporter ATP-binding protein YbhF.
 
 
 0.751
ybhR_2
Inner membrane transport permease YbhR.
  
  
 0.737
drrA_11
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.736
drrA_1
Doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.708
drrA_7
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.700
drrA_3
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.674
ytrB
ABC transporter ATP-binding protein YtrB.
 
 
 0.659
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
 
 0.611
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.