Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY52894.1N-carbamoyl-D-amino acid hydrolase. (293 aa)    
Predicted Functional Partners:
thiL_1
Thiamine-monophosphate kinase.
 
   
 0.971
lipA_1
Lipoyl synthase.
 
     0.967
pimA_2
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
 
    0.963
czcO_3
Putative oxidoreductase CzcO.
 
  
 0.953
AMY52897.1
Hypothetical protein.
 
   
 0.947
AMY52893.1
Hypothetical protein.
 
  
 0.942
ramA_2
(R)-stereoselective amidase.
 
    
0.885
aguA
Putative agmatine deiminase; Belongs to the agmatine deiminase family.
  
 0.445
pstB1
Phosphate import ATP-binding protein PstB 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
   
  
 0.401
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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