Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY53038.1Putative quercetin 2,3-dioxygenase; Belongs to the pirin family. (260 aa)    
Predicted Functional Partners:
fosB2
Metallothiol transferase FosB 2.
  
  
 0.687
AMY52918.1
Putative quercetin 2,3-dioxygenase; Belongs to the pirin family.
 
     0.685
AMY53041.1
Putative quercetin 2,3-dioxygenase; Belongs to the pirin family.
 
    
0.502
mprA_2
Transcriptional repressor MprA.
       0.487
todS
Sensor histidine kinase TodS.
 
    0.414
ygiD
4,5-DOPA dioxygenase extradiol.
 
  
 0.410
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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