Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY53133.1Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (223 aa)    
Predicted Functional Partners:
AMY53132.1
Hypothetical protein.
       0.743
fabG_12
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.680
lvr
Levodione reductase.
 
    0.637
limC
(-)-trans-carveol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.595
bdhA_1
D-beta-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.589
fabG_4
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.559
AMY53131.1
Hypothetical protein.
       0.555
kduD
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
 
    0.551
fabG_6
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.510
AMY53798.1
Putative oxidoreductase.
  
     0.502
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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