Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY53148.1Putative MFS-type transporter. (428 aa)    
Predicted Functional Partners:
AMY53145.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
     
 0.729
AMY53147.1
Hypothetical protein.
       0.729
AMY53149.1
Hypothetical protein.
       0.612
AMY53748.1
Hypothetical protein.
  
     0.586
nudC_2
NADH pyrophosphatase; Belongs to the Nudix hydrolase family.
  
     0.572
AMY55729.1
Phosphatidylinositol mannoside acyltransferase.
  
   
 0.551
AMY53106.1
Hypothetical protein.
 
   
 0.540
AMY53146.1
Putative HTH-type transcriptional regulator.
       0.509
AMY55979.1
Hypothetical protein.
  
     0.479
eis
Enhanced intracellular survival protein.
   
    0.470
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.