Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pknA_1Serine/threonine-protein kinase PknA. (458 aa)    
Predicted Functional Partners:
pstP
PP2C-family Ser/Thr phosphatase.
 
 
 0.992
pknB
Serine/threonine-protein kinase PknB.
 
 
0.984
fhaB
FHA domain-containing protein FhaB.
 
 
 
 0.965
pbpA_2
Penicillin-binding protein A.
  
  
 0.953
rodA_1
Putative FtsW-like protein; Belongs to the SEDS family.
  
 
 0.946
garA
Glycogen accumulation regulator GarA.
 
 
 
 0.935
fhaA
FHA domain-containing protein FhaA.
 
 
 
 0.862
AMY55272.1
Cell wall synthesis protein Wag31.
   
 
 0.696
pknL_1
Serine/threonine-protein kinase PknL.
 
 
0.625
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
   
  
 0.624
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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