Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY53249.1Hypothetical protein. (77 aa)    
Predicted Functional Partners:
menG_1
Demethylmenaquinone methyltransferase.
       0.801
pds
15-cis-phytoene desaturase.
       0.801
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
  
 0.741
ctpA
Cation-transporting P-type ATPase A.
       0.674
AMY53247.1
Hypothetical protein.
       0.631
ysnE
Putative N-acetyltransferase YsnE.
       0.615
AMY55478.1
Hypothetical protein.
   
    0.605
mshD_3
Mycothiol acetyltransferase.
       0.563
gltB_1
Glutamate synthase [NADPH] large chain.
       0.518
gltB_2
Glutamate synthase [NADPH] large chain.
       0.518
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.