Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY53325.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
AMY52125.1
Hypothetical protein.
  
     0.744
sodA
Mn superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.735
AMY53711.1
Hypothetical protein.
  
     0.715
AMY51677.1
Hypothetical protein.
  
     0.656
AMY53911.1
Hypothetical protein.
 
   
 0.647
AMY54152.1
Hypothetical protein.
  
    0.641
AMY56081.1
Hypothetical protein.
  
     0.616
AMY53830.1
Hypothetical protein.
  
     0.592
AMY52121.1
Hypothetical protein.
  
     0.591
AMY53899.1
Hypothetical protein.
  
     0.567
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.