Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY53357.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
AMY53356.1
Hypothetical protein.
       0.773
AMY53358.1
Hypothetical protein.
       0.723
AMY52144.1
Hypothetical protein.
 
     0.628
AMY53642.1
Hypothetical protein.
  
  
 0.618
AMY52985.1
Hypothetical protein.
 
     0.598
AMY54194.1
Hypothetical protein.
 
     0.514
AMY54407.1
Hypothetical protein.
 
     0.505
AMY55296.1
Hypothetical protein.
  
     0.505
AMY55893.1
Hypothetical protein.
  
     0.497
AMY55841.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.