Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
perGDP-perosamine synthase; Belongs to the DegT/DnrJ/EryC1 family. (366 aa)    
Predicted Functional Partners:
iolX
Scyllo-inositol 2-dehydrogenase (NAD(+)).
 
  
 0.974
wbbL_2
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
  
  
 0.944
gumD_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 0.925
gumD_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 0.922
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 0.919
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 0.918
lpxA
Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase.
 
   
 0.823
AMY53396.1
Hypothetical protein.
 
     0.623
rmlB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.602
rmlA_1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.586
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.