Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fdrFerredoxin--NAD(P)(+) reductase fdr. (387 aa)    
Predicted Functional Partners:
hcaC
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit.
 
  
 0.910
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.734
antA
Anthranilate 1,2-dioxygenase large subunit.
 
   
 0.704
nirD
Nitrite reductase (NADH) small subunit.
 
  
 0.596
alkG
Rubredoxin-2; Belongs to the rubredoxin family.
  
 
 0.592
rubA
Rubredoxin.
  
 
 0.592
gltB_1
Glutamate synthase [NADPH] large chain.
  
  
 0.581
gltB_2
Glutamate synthase [NADPH] large chain.
  
  
 0.581
nasE
Assimilatory nitrite reductase [NAD(P)H] small subunit.
 
  
 0.569
nasF
Uroporphyrinogen-III C-methyltransferase.
  
  
 0.557
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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