Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hcaC3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit. (120 aa)    
Predicted Functional Partners:
bedA
Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit.
 
 
 0.956
thcD_2
Rhodocoxin reductase.
  
 
 0.946
thcD_1
Rhodocoxin reductase.
  
 0.943
fdr
Ferredoxin--NAD(P)(+) reductase fdr.
 
  
 0.910
antA
Anthranilate 1,2-dioxygenase large subunit.
 
  
 0.776
nasF
Uroporphyrinogen-III C-methyltransferase.
  
  
 0.660
cysG
Siroheme synthase.
  
  
 0.648
nasD_1
Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.628
rspR_6
HTH-type transcriptional repressor RspR.
 
     0.514
nasD_2
Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.461
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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