Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
citECitrate lyase subunit beta-like protein; Belongs to the HpcH/HpaI aldolase family. (269 aa)    
Predicted Functional Partners:
paaZ_1
Bifunctional protein PaaZ.
 
  
 0.986
AMY53502.1
Methylmalonyl-CoA carboxyltransferase 12S subunit.
  
  
 0.921
acdA_6
Acyl-CoA dehydrogenase.
 
  
 0.904
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
  
 0.904
mch
Mesaconyl-CoA hydratase.
 
  
 0.885
kstR2_4
HTH-type transcriptional repressor KstR2.
 
   
 0.689
aacA4
Aminoglycoside N(6')-acetyltransferase type 1.
      
 0.618
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.618
acrR
HTH-type transcriptional regulator AcrR.
      
 0.618
ulaF
L-ribulose-5-phosphate 4-epimerase UlaF.
   
    0.587
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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