Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY53502.1Methylmalonyl-CoA carboxyltransferase 12S subunit. (525 aa)    
Predicted Functional Partners:
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 0.997
acdA_6
Acyl-CoA dehydrogenase.
  
 
 0.957
fadB_3
Fatty acid oxidation complex subunit alpha.
  
 
 0.954
fadJ
Fatty acid oxidation complex subunit alpha.
  
 
 0.954
kipA_1
KipI antagonist.
  
 0.949
bbsG_1
(R)-benzylsuccinyl-CoA dehydrogenase.
  
 
 0.933
AMY52454.1
Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase.
  
 
 0.933
bbsG_3
(R)-benzylsuccinyl-CoA dehydrogenase.
  
 
 0.933
mmgC_4
Acyl-CoA dehydrogenase.
  
 
 0.933
AMY55925.1
Acyl-CoA dehydrogenase, short-chain specific.
  
 
 0.930
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]