Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
catCMuconolactone Delta-isomerase. (94 aa)    
Predicted Functional Partners:
ykfB
L-Ala-D/L-Glu epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.985
clcA
Chlorocatechol 1,2-dioxygenase.
 
  
 0.978
catD
3-oxoadipate enol-lactonase 2.
 
 
 0.949
npcC
Hydroxyquinol 1,2-dioxygenase.
 
  
 0.860
pcaH
Protocatechuate 3,4-dioxygenase beta chain.
 
  
 0.795
hcaR_3
Hca operon transcriptional activator HcaR; Belongs to the LysR transcriptional regulatory family.
 
   
 0.779
pcaG
Protocatechuate 3,4-dioxygenase alpha chain.
 
  
 0.765
pcaB
3-carboxy-cis,cis-muconate cycloisomerase.
 
   
 0.730
pcaR
Pca regulon regulatory protein.
 
   
 0.706
pcaF
Beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.650
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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