Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaZ_2Bifunctional protein PaaZ. (675 aa)    
Predicted Functional Partners:
paaG_1
1,2-epoxyphenylacetyl-CoA isomerase.
 
 0.979
paaI
Acyl-coenzyme A thioesterase PaaI.
 
  
 0.969
paaG_2
1,2-epoxyphenylacetyl-CoA isomerase.
  
 0.953
paaD
Putative 1,2-phenylacetyl-CoA epoxidase, subunit D.
 
  
 0.919
paaB
1,2-phenylacetyl-CoA epoxidase, subunit B.
 
  
 0.903
paaA
1,2-phenylacetyl-CoA epoxidase, subunit A.
 
  
 0.888
paaC
1,2-phenylacetyl-CoA epoxidase, subunit C.
 
  
 0.887
paaJ_1
3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.880
AMY53574.1
Hypothetical protein.
       0.879
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
 
  
 0.857
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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