Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cotASpore coat protein A. (610 aa)    
Predicted Functional Partners:
mauC
Amicyanin.
   
 
 0.803
tatC_1
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.659
tatC_2
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.659
AMY55202.1
Hypothetical protein.
  
 
 0.654
AMY55523.1
Hypothetical protein.
  
 
 0.637
AMY52205.1
Putative two-component membrane permease complex subunit.
  
  
 0.631
todS
Sensor histidine kinase TodS.
  
 
 0.608
sugC_3
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
       0.538
kinE
Sporulation kinase E.
  
 
 0.525
AMY52576.1
Hypothetical protein.
  
 
 0.515
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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