Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMY53727.1Putative diacylglycerol O-acyltransferase. (462 aa)    
Predicted Functional Partners:
araA_2
L-arabinose 1-dehydrogenase.
       0.752
AMY54107.1
Putative Rieske 2Fe-2S iron-sulfur protein.
  
  
 0.611
AMY52402.1
Hypothetical protein.
  
 
 0.600
AMY54297.1
Hypothetical protein.
  
     0.592
lcfB_9
Long-chain-fatty-acid--CoA ligase.
 
    0.591
baeB_2
Putative polyketide biosynthesis zinc-dependent hydrolase BaeB.
       0.540
mbtB
Phenyloxazoline synthase MbtB.
  
 
 0.527
AMY53115.1
Hypothetical protein.
  
     0.525
AMY53900.1
Hypothetical protein.
 
 
 
 0.513
ppsA
Phthiocerol synthesis polyketide synthase type I PpsA.
  
  
 0.507
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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