Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ethA_2FAD-containing monooxygenase EthA. (496 aa)    
Predicted Functional Partners:
ephD_6
Putative oxidoreductase EphD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.710
proC_1
Pyrroline-5-carboxylate reductase.
     
 0.649
betI_7
HTH-type transcriptional regulator BetI.
 
   
 0.636
sadH_2
Putative oxidoreductase SadH; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.627
AMY53492.1
Hypothetical protein.
  
 
   0.537
AMY55605.1
Putative trans-acting enoyl reductase.
 
   
 0.500
rdmC
Aclacinomycin methylesterase RdmC.
 
 0.458
estB_5
Esterase EstB.
  
     0.400
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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