Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
proC_1Pyrroline-5-carboxylate reductase. (219 aa)    
Predicted Functional Partners:
ethA_2
FAD-containing monooxygenase EthA.
     
 0.649
ephD_6
Putative oxidoreductase EphD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.581
abfB
Extracellular exo-alpha-L-arabinofuranosidase.
  
     0.460
betI_7
HTH-type transcriptional regulator BetI.
       0.437
AMY52261.1
Glucan endo-1,3-beta-glucosidase.
  
     0.401
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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