Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
clsBCardiolipin synthase B. (557 aa)    
Predicted Functional Partners:
AMY54684.1
Hypothetical protein.
    
 0.630
AMY54742.1
Hypothetical protein.
    
 0.630
surE
5'-nucleotidase SurE.
     
 0.622
lacC
Tagatose-6-phosphate kinase.
       0.601
AMY53788.1
Putative oxidoreductase.
       0.571
AMY55725.1
Hypothetical protein.
 
 
 0.558
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 0.553
AMY52511.1
Hypothetical protein.
 
     0.503
AMY52482.1
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
    0.485
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.484
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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