Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMY53798.1Putative oxidoreductase. (275 aa)    
Predicted Functional Partners:
bbsG_3
(R)-benzylsuccinyl-CoA dehydrogenase.
 
    0.893
ephD_5
Putative oxidoreductase EphD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.737
fabG_4
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.697
yfmC_3
Fe(3+)-citrate-binding protein YfmC.
   
   0.674
fabG_5
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.670
fabG_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.609
sseB
Putative thiosulfate sulfurtransferase SseB.
       0.571
fabG_10
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.567
fabG_6
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.529
fabG_13
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.524
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.