Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
alcAllantoicase; Belongs to the allantoicase family. (320 aa)    
Predicted Functional Partners:
uao
Uric acid degradation bifunctional protein.
  
 0.972
pgdA
Peptidoglycan deacetylase.
 
 
 0.944
ureA
Urease subunit alpha; Belongs to the urease beta subunit family.
    
  0.927
ureC
Urease subunit alpha.
    
  0.906
AMY55507.1
Hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
 
     0.831
AMY53830.1
Hypothetical protein.
       0.770
hiuH
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.759
uox
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.702
proS_1
Proline--tRNA ligase.
       0.700
AMY52988.1
8-oxoguanine deaminase.
 
  
 0.590
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.