Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bpoC_2Putative non-heme bromoperoxidase BpoC. (269 aa)    
Predicted Functional Partners:
AMY53862.1
2-(acetamidomethylene)succinate hydrolase.
 
     0.886
cpo_2
Non-heme chloroperoxidase.
  
     0.668
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
  
     0.643
yvaM_1
AB hydrolase superfamily protein YvaM.
  
     0.629
mhuD
Heme-degrading monooxygenase HmoB.
       0.584
cpo_4
Non-heme chloroperoxidase.
  
     0.577
cpo_1
Non-heme chloroperoxidase.
  
   
 0.565
rsbQ
Sigma factor SigB regulation protein RsbQ.
  
     0.521
AMY51535.1
Arylesterase.
  
     0.517
cpo_3
Non-heme chloroperoxidase.
  
     0.513
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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