Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
budC_2Diacetyl reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)    
Predicted Functional Partners:
fabG_4
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.718
isfD_2
Sulfoacetaldehyde reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.706
ydfG_2
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.683
linC_1
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
 
    0.617
ephD_5
Putative oxidoreductase EphD; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.613
bdcA
Cyclic-di-GMP-binding biofilm dispersal mediator protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.602
fabG_5
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
    0.597
AMY52292.1
Putative short-chain type dehydrogenase/reductase.
 
    0.596
tsnR
23S rRNA (adenosine(1067)-2'-O)-methyltransferase.
       0.589
AMY53911.1
Hypothetical protein.
       0.580
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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