Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
czcD_1Metal cation efflux system protein CzcD. (309 aa)    
Predicted Functional Partners:
AMY52632.1
Hypothetical protein.
  
 0.622
AMY53919.1
Hypothetical protein.
       0.611
AMY53918.1
Hypothetical protein.
       0.556
AMY52401.1
Hypothetical protein.
       0.527
AMY55523.1
Hypothetical protein.
  
  
 0.518
cotA
Spore coat protein A.
 
  
 0.491
mntH_1
Divalent metal cation transporter MntH.
  
 
 0.479
AMY52627.1
Hypothetical protein.
 
 
 0.468
ctpE
Putative cation-transporting ATPase E.
    
 0.453
AMY53917.1
Hypothetical protein.
       0.427
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.