Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fprANADPH-ferredoxin reductase FprA. (461 aa)    
Predicted Functional Partners:
gltB_1
Glutamate synthase [NADPH] large chain.
  
 
 0.999
gltB_2
Glutamate synthase [NADPH] large chain.
  
 
 0.999
sir
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.833
cysH_1
Putative phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
  
  
 0.832
mdeA_1
Methionine gamma-lyase.
  
  
 0.778
nuoF
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 
 0.733
nuoE
NADH-quinone oxidoreductase subunit E.
  
 
 0.731
fdxA
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
 
 0.705
mdeA_2
Methionine gamma-lyase.
  
    0.675
metQ
Methionine-binding lipoprotein MetQ.
   
    0.590
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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