Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gsiA_4Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (532 aa)    
Predicted Functional Partners:
ddpC_3
Putative D,D-dipeptide transport system permease protein DdpC.
 
 0.992
gsiC_2
Glutathione transport system permease protein GsiC.
 
 
 0.979
nikB_2
Nickel transport system permease protein NikB.
 
 
 0.965
AMY54665.1
Putative peptide transport permease protein.
 
 
 0.956
gsiD
Glutathione transport system permease protein GsiD.
 
 0.943
oppC
Oligopeptide transport system permease protein OppC.
 
 0.941
ddpC_1
Putative D,D-dipeptide transport system permease protein DdpC.
 
 0.936
AMY54666.1
Putative peptide transport permease protein.
 
 0.933
nikA_2
Nickel-binding periplasmic protein.
 
 
 0.916
dppB_2
Dipeptide transport system permease protein DppB.
 
 
 0.910
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
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