Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fadR_4Fatty acid metabolism regulator protein. (191 aa)    
Predicted Functional Partners:
msuD_2
Methanesulfonate monooxygenase.
 
     0.652
kstR
HTH-type transcriptional repressor KstR.
  
    0.645
yhdN_4
General stress protein 69.
 
     0.605
AMY53581.1
Putative HTH-type transcriptional regulator.
   
    0.599
AMY53625.1
Hypothetical protein.
  
  
 0.549
arsB
Arsenical pump membrane protein.
  
   
 0.520
AMY52297.1
Putative HTH-type transcriptional regulator.
  
     0.497
arpA_4
A-factor receptor protein.
  
    0.490
cdhR_2
HTH-type transcriptional regulator CdhR.
   
    0.486
AMY53043.1
Hypothetical protein.
  
     0.480
Your Current Organism:
Rhodococcus fascians D188
NCBI taxonomy Id: 1051973
Other names: R. fascians D188, Rhodococcus fascians str. D188, Rhodococcus fascians strain D188
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.